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Article

HLApers: HLA Typing and Quantification of Expression with Personalized Index.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2020

Aguiar Vitor R C, Masotti Cibele, Camargo Anamaria A, Meyer Diogo

Abstract excerpt

The plethora of RNA-seq data which have been generated in the recent years constitutes an attractive resource to investigate HLA variation and its relationship with normal and disease phenotypes, such as cancer. However, next generation sequencing (NGS) brings new challenges to HLA analysis because of the mapping bias introduced by aligning short reads originated from polymorphic genes to a single reference...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 32124314
DOI: 10.1007/978-1-0716-0327-7_7

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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