Article
HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology.
Genome research - 1 Sept 2017
Shrestha Raunak, Hodzic Ermin, Sauerwald Thomas, Dao Phuong, Wang Kendric, Yeung Jake, Anderson Shawn, Vandin Fabio, Haffari Gholamreza, Collins Colin C, Sahinalp S Cenk
Abstract excerpt
Prioritizing molecular alterations that act as drivers of cancer remains a crucial bottleneck in therapeutic development. Here we introduce HIT'nDRIVE, a computational method that integrates genomic and transcriptomic data to identify a set of patient-specific, sequence-altered genes, with sufficient collective influence over dysregulated transcripts. HIT'nDRIVE aims to solve the "random walk facility location"...
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