Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

neomerDB: a comprehensive database of neomer biomarkers in cancer.

Database : the journal of biological databases and curation - 15 Jan 2026

Provatas Kimonas, Chan Candace S Y, Kerasiotis Ioannis, Bochalis Eleftherios, Nayak Akshatha, Zacharia Brad E, Pavlopoulos Georgios A, Li Wei, Georgakopoulos-Soares Ilias

Abstract excerpt

The development of biomarkers for population screening, early cancer detection, monitoring, and recurrence surveillance offers substantial potential to improve patient outcomes and save lives. Nullomers are short k-mers that are absent from a human genome, and neomers are the subset of nullomers that emerge recurrently due to somatic mutations during cancer development. Here, we have developed neomerDB, a...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Biomarkers, Tumor
Share to Databases, Genetic

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome, Human

Share to Mutation

Share to Neoplasms

Source

Open in PubMed Open full text

Identifiers

PMID: 41676903
DOI: 10.1093/database/baag006
PMCID: PMC12895195

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 8 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

neomerDB: a comprehensive database of neomer biomarkers in cancer.PMID 41676903Read ↗

Utilizing nullomers in cell-free RNA for early cancer detection.Semantic proximity Read ↗

Utilizing nullomers in cell-free RNA for early cancer detectionSemantic proximity Read ↗

Leveraging sequences missing from the human genome to diagnose cancerSemantic proximity Read ↗

Peptide absent sequences emerging in human cancers.Semantic proximity Read ↗

Detecting known neoepitopes, gene fusions, transposable elements, and circular RNAs in cell-free RNASemantic proximity Read ↗

Exome diagnostics: already a reality?Semantic proximity Read ↗

Ultra-low coverage fragmentomic model of cell-free DNA for cancer detection based on whole-exome regionsSemantic proximity Read ↗

Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing FeaturesSemantic proximity Read ↗

Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features.Semantic proximity Read ↗

The ALT pathway generates telomere fusions that can be detected in the blood of cancer patientsSemantic proximity Read ↗

Tracking Cancer Genetic Evolution using OncoTrack.Semantic proximity Read ↗

A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutationsSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.