Article
CLEMENT: genomic decomposition and reconstruction of non-tumor subclones.
Nucleic acids research - 12 Aug 2024
Chung Young-Soo, Kang Seungseok, Kim Jisu, Lee Sangbo, Kim Sangwoo
Abstract excerpt
Genome-level clonal decomposition of a single specimen has been widely studied; however, it is mostly limited to cancer research. In this study, we developed a new algorithm CLEMENT, which conducts accurate decomposition and reconstruction of multiple subclones in genome sequencing of non-tumor (normal) samples. CLEMENT employs the Expectation-Maximization (EM) algorithm with optimization strategies specific to...
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