Article
A benchmark study on current GWAS models in admixed populations.
Briefings in bioinformatics - 22 Nov 2023
Yang Zikun, Cieza Basilio, Reyes-Dumeyer Dolly, Montesinos Rosa, Soto-Añari Marcio, Custodio Nilton, Tosto Giuseppe
Abstract excerpt
OBJECTIVE: The performances of popular genome-wide association study (GWAS) models have not been examined yet in a consistent manner under the scenario of genetic admixture, which introduces several challenging aspects: heterogeneity of minor allele frequency (MAF), wide spectrum of case-control ratio, varying effect sizes, etc. METHODS: We generated a cohort of synthetic individuals (N = 19 234) that simulates...
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