Article

Hierarchical refinements of cis-regulatory inputs improve scalable gene expression prediction

2026-06-02

Abstract excerpt

Deciphering the relationships between cis-regulatory elements (CREs) and target gene expression has long been a challenging problem in molecular biology. However, predicting gene expression from hundreds of candidate cis-regulatory elements (cCREs) requires models that scale to long, noisy inputs while retaining interpretable regulatory structure. Existing Transformer-based approaches typically attend over all nuc...

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Literature Corpus work: ffa03115-0536-5ed4-a50f-2020aae4a8e6
DOI: 10.64898/2026.05.31.729151

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