Article

SPLASH2 provides ultra-efficient, scalable, and unsupervised discovery on raw sequencing reads

2023-03-21

Abstract excerpt

SPLASH is an unsupervised, reference-free, and unifying algorithm that discovers regulated sequence variation through statistical analysis of k -mer composition, subsuming many application-specific methods. Here, we introduce SPLASH2, a fast, scalable implementation of SPLASH based on an efficient k -mer counting approach. SPLASH2 enables rapid analysis of massive datasets from a wide range of sequencing technol...

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Literature Corpus work: 2729f9cd-024f-5160-bf9a-25596493b32d
DOI: 10.1101/2023.03.17.533189

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