Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Codon bias variation in Staphylococcus aureus.

PloS one - 1 Jan 2026

O'Connor Kathleen, Mallinger Benjamin D, Bedard Nicholas A, Patel Robin

Abstract excerpt

BACKGROUND: Staphylococcus aureus causes a multiplicity of human diseases acquired in community and healthcare settings alike around the globe. While most studies focus on coding changes to assess genome evolution and study genetic adaptation, interrogation of silent mutations in the form of synonymous codon usage bias is less well-studied. As such, understanding of patterns in codon bias at the gene and genome...

Read the complete abstract on PubMed

Topics

Staphylococcus aureus
Codon Usage
Genome, Bacterial
Humans
Codon
Genetic Variation
Bacterial Proteins

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Source

Open in PubMed Open full text

Identifiers

PMID: 42715188
DOI: 10.1371/journal.pone.0356997
PMCID: PMC13557361

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 25 Oct 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Codon bias variation in Staphylococcus aureus.PMID 42715188Read ↗

A large-scale analysis of codon usage bias in 4868 bacterial genomes shows association of codon adaptation index with GC content, protein functional domains and bacterial phenotypes.Semantic proximity Read ↗

CBDB: the codon bias database.Semantic proximity Read ↗

Variation in global codon usage bias among prokaryotic organisms is associated with their lifestyles.Semantic proximity Read ↗

Codon Bias as a Means to Fine-Tune Gene Expression.Semantic proximity Read ↗

Transcriptomic, proteomic and functional consequences of codon usage bias in human cells during heterologous gene expressionSemantic proximity Read ↗

scnRCA: a novel method to detect consistent patterns of translational selection in mutationally-biased genomes.Semantic proximity Read ↗

Coding-sequence determinants of gene expression in Escherichia coli.Semantic proximity Read ↗

The Dynamic Codon Biaser: calculating prokaryotic codon usage biases.Semantic proximity Read ↗

Codon Usage in SARS-CoV-2 Spike: Global Dominance of the Suboptimal TAG Stop Codon and Amino Acid Specific Biases from 9.3 Million GenomesSemantic proximity Read ↗

Codon Deviation Coefficient: a novel measure for estimating codon usage bias and its statistical significance.Semantic proximity Read ↗

Codon usage bias in prokaryotic genomes and environmental adaptationSemantic proximity Read ↗

Codon usage bias and environmental adaptation in microbial organisms.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.