Article
A structurally informed human protein-protein interactome reveals proteome-wide perturbations caused by disease mutations.
Nature biotechnology - 1 Sept 2025
Xiong Dapeng, Qiu Yunguang, Zhao Junfei, Zhou Yadi, Lee Dongjin, Gupta Shobhita, Torres Mateo, Lu Weiqiang, Liang Siqi, Kang Jin Joo, Eng Charis, Loscalzo Joseph, Cheng Feixiong, Yu Haiyuan
Abstract excerpt
To assist the translation of genetic findings to disease pathobiology and therapeutics discovery, we present an ensemble deep learning framework, termed PIONEER (Protein-protein InteractiOn iNtErfacE pRediction), that predicts protein-binding partner-specific interfaces for all known protein interactions in humans and seven other common model organisms to generate comprehensive structurally informed protein...
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