Article
Evolving copy number gains promote tumor expansion and bolster mutational diversification.
Nature communications - 6 Mar 2024
Wang Zicheng, Xia Yunong, Mills Lauren, Nikolakopoulos Athanasios N, Maeser Nicole, Dehm Scott M, Sheltzer Jason M, Sun Ruping
Abstract excerpt
The timing and fitness effect of somatic copy number alterations (SCNA) in cancer evolution remains poorly understood. Here we present a framework to determine the timing of a clonal SCNA that encompasses multiple gains. This involves calculating the proportion of time from its last gain to the onset of population expansion (lead time) as well as the proportion of time prior to its first gain (initiation time)....
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