The role of sequence in altering the unfolding pathway of an RNA pseudoknot: a steered molecular dynamics study.

doi:10.1039/c6cp04617g

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Article

The role of sequence in altering the unfolding pathway of an RNA pseudoknot: a steered molecular dynamics study.

Physical chemistry chemical physics : PCCP - 19 Oct 2016

Gupta Asmita, Bansal Manju

Abstract excerpt

Mechanical unfolding studies on Ribonucleic Acid (RNA) structures are a subject of tremendous interest as they shed light on the principles of higher order assembly of these structures. Pseudoknotting is one of the most elementary ways in which this higher order assembly is achieved as discrete secondary structural units in RNA are brought in close proximity to form a tertiary structure. Using steered molecular...

Topics

Base Pairing
Molecular Dynamics Simulation
Mutation
Nucleic Acid Conformation
RNA

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Open in PubMed

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PMID: 27722489
DOI: 10.1039/c6cp04617g

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