Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

NMR structure of a classical pseudoknot: interplay of single- and double-stranded RNA.

Science (New York, N.Y.) - 17 Apr 1998

Kolk M H, van der Graaf M, Wijmenga S S, Pleij C W, Heus H A, Hilbers C W

Abstract excerpt

Pseudoknot formation folds the 3' ends of many plant viral genomic RNAs into structures that resemble transfer RNA in global folding and in their reactivity to transfer RNA-specific proteins. The solution structure of the pseudoknotted T arm and acceptor arm of the transfer RNA-like structure of turnip yellow mosaic virus (TYMV) was determined by nuclear magnetic resonance (NMR) spectroscopy. The molecule is...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Binding Sites
Share to Hydrogen Bonding
Share to Magnetic Resonance Spectroscopy

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Models, Molecular

Share to Mutation

Share to Nucleic Acid Conformation

Share to RNA, Transfer

Share to RNA, Viral

Source

Identifiers

PMID: 9545221
DOI: 10.1126/science.280.5362.434

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

NMR structure of a classical pseudoknot: interplay of single- and double-stranded RNA.PMID 9545221Read ↗

Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting.Semantic proximity Read ↗

A loop 2 cytidine-stem 1 minor groove interaction as a positive determinant for pseudoknot-stimulated -1 ribosomal frameshifting.Semantic proximity Read ↗

Conformation of a non-frameshifting RNA pseudoknot from mouse mammary tumor virus.Semantic proximity Read ↗

Deciphering the sequence-dependent unfolding pathways of an RNA pseudoknot with steered molecular dynamics.Semantic proximity Read ↗

Base-pairings within the RNA pseudoknot associated with the simian retrovirus-1 gag-pro frameshift site.Semantic proximity Read ↗

A characteristic bent conformation of RNA pseudoknots promotes -1 frameshifting during translation of retroviral RNA.Semantic proximity Read ↗

Local structural and environmental factors define the efficiency of an RNA pseudoknot involved in programmed ribosomal frameshift process.Semantic proximity Read ↗

A Phylogenetically Conserved Hairpin-Type 3′ Untranslated Region Pseudoknot Functions in Coronavirus RNA ReplicationSemantic proximity Read ↗

Pseudoknot preorganization of the preQ1 class I riboswitch.Semantic proximity Read ↗

The role of sequence in altering the unfolding pathway of an RNA pseudoknot: a steered molecular dynamics study.Semantic proximity Read ↗

Specific mutations in a viral RNA pseudoknot drastically change ribosomal frameshifting efficiency.Semantic proximity Read ↗

Crystal structure of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) frameshifting pseudoknot.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.