Article
A novel framework for analyzing somatic copy number aberrations and tumor subclones for paired heterogeneous tumor samples.
Bio-medical materials and engineering - 1 Jan 2015
Xia Hong, Li Ao, Yu Zhenhua, Liu Xiaocheng, Feng Huanqing
Abstract excerpt
Application of the Next generation sequencing (NGS) technology has demonstrated that most tumor samples exhibit intra-tumor heterogeneity. Here we proposed SAPPH (Somatic Aberrations Prediction for Paired Heterogeneous tumor samples), as a new method for estimating tumor somatic copy number aberrations as well as inferring tumor subclone proportions from heterogeneous tumor sequencing data. This method is based...
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