Article
GREGOR: evaluating global enrichment of trait-associated variants in epigenomic features using a systematic, data-driven approach.
Bioinformatics (Oxford, England) - 15 Aug 2015
Schmidt Ellen M, Zhang Ji, Zhou Wei, Chen Jin, Mohlke Karen L, Chen Y Eugene, Willer Cristen J
Abstract excerpt
MOTIVATION: The majority of variation identified by genome wide association studies falls in non-coding genomic regions and is hypothesized to impact regulatory elements that modulate gene expression. Here we present a statistically rigorous software tool GREGOR (Genomic Regulatory Elements and Gwas Overlap algoRithm) for evaluating enrichment of any set of genetic variants with any set of regulatory features....
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