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Article

Using SomaticSniper to Detect Somatic Single Nucleotide Variants.

Current protocols in bioinformatics - 1 Jan 2014

Larson David E, Abbott Travis E, Wilson Richard K

Abstract excerpt

Detecting somatic single nucleotide variants (SNVs) is an essential component of cancer research with next generation sequencing data. This protocol describes how to run the SomaticSniper somatic SNV detector and then filter the output to eliminate most false positives. It also includes support protocols detailing the compilation of the software.

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Identifiers

PMID: 25431635
DOI: 10.1002/0471250953.bi1505s45
PMCID: PMC4242521

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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