Article
Transcriptome-wide analysis of exosome targets.
Molecular cell - 9 Nov 2012
Schneider Claudia, Kudla Grzegorz, Wlotzka Wiebke, Tuck Alex, Tollervey David
Abstract excerpt
The exosome plays major roles in RNA processing and surveillance but the in vivo target range and substrate acquisition mechanisms remain unclear. Here we apply in vivo RNA crosslinking (CRAC) to the nucleases (Rrp44, Rrp6), two structural subunits (Rrp41, Csl4) and a cofactor (Trf4) of the yeast exosome. Analysis of wild-type Rrp44 and catalytic mutants showed that both the CUT and SUT classes of non-coding RNA,...
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