Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast.

RNA (New York, N.Y.) - 1 Sept 2018

Atkinson Sophie R, Marguerat Samuel, Bitton Danny A, Rodríguez-López Maria, Rallis Charalampos, Lemay Jean-François, Cotobal Cristina, Malecki Michal, Smialowski Pawel, Mata Juan, Korber Philipp, Bachand François, Bähler Jürg

Abstract excerpt

Long noncoding RNAs (lncRNAs), which are longer than 200 nucleotides but often unstable, contribute a substantial and diverse portion to pervasive noncoding transcriptomes. Most lncRNAs are poorly annotated and understood, although several play important roles in gene regulation and diseases. Here we systematically uncover and analyze lncRNAs in Schizosaccharomyces pombe. Based on RNA-seq data from twelve...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Exonucleases
Share to Exosomes

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Meiosis

Share to Molecular Sequence Annotation

Share to RNA, Fungal

Share to RNA, Long Noncoding

Share to RNA Stability

Share to Schizosaccharomyces

Source

Open in PubMed Open full text

Identifiers

PMID: 29914874
DOI: 10.1261/rna.065524.118
PMCID: PMC6097657

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast.PMID 29914874Read ↗

Nonsense-Mediated Decay Restricts LncRNA Levels in Yeast Unless Blocked by Double-Stranded RNA Structure.Semantic proximity Read ↗

Skip and bin: pervasive alternative splicing triggers degradation by nuclear RNA surveillance in fission yeastSemantic proximity Read ↗

Functional and transcriptional profiling of non-coding RNAs in yeast reveal context-dependent phenotypes and in trans effects on the protein regulatory network.Semantic proximity Read ↗

Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance.Semantic proximity Read ↗

The role of nonsense-mediated mRNA decay in restricting long noncoding RNA expression has been conserved in RNAi-capable budding yeast.Semantic proximity Read ↗

A yeast exosome cofactor, Mpp6, functions in RNA surveillance and in the degradation of noncoding RNA transcripts.Semantic proximity Read ↗

Cytoplasmic decay of intergenic transcripts in Saccharomyces cerevisiae.Semantic proximity Read ↗

Using pan RNA-seq analysis to reveal the ubiquitous existence of 5’ end and 3’ end small RNAsSemantic proximity Read ↗

Extensive degradation of RNA precursors by the exosome in wild-type cells.Semantic proximity Read ↗

Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA.Semantic proximity Read ↗

Interconnections Between RNA-Processing Pathways Revealed by a Sequencing-Based Genetic Screen for Pre-mRNA Splicing Mutants in Fission Yeast.Semantic proximity Read ↗

Multiple Quality Control Checkpoints Safeguard Small Nuclear RNA Biogenesis and Prevent Assembly of Aberrant SpliceosomesSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.