Article
Gene- or region-based association study via kernel principal component analysis.
BMC genetics - 26 Aug 2011
Gao Qingsong, He Yungang, Yuan Zhongshang, Zhao Jinghua, Zhang Bingbing, Xue Fuzhong
Abstract excerpt
BACKGROUND: In genetic association study, especially in GWAS, gene- or region-based methods have been more popular to detect the association between multiple SNPs and diseases (or traits). Kernel principal component analysis combined with logistic regression test (KPCA-LRT) has been successfully used in classifying gene expression data. Nevertheless, the purpose of association study is to detect the correlation...
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