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Benchmarking Illumina and Oxford Nanopore Technologies (ONT) sequencing platforms for whole genome sequencing of bacterial genomes and use in clinical microbiology

2025-07-10

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<title>Abstract</title> <p> Background In microbial diagnostics, whole-genome sequencing (WGS) is used to address key questions such as species identification, presence of antimicrobial resistance genes (ARGs), virulence genes, and outbreak detection. The choice of sequencing technology is crucial to ensure high-quality data, cost-effectiveness, and efficient reporting times. We aimed to compare Illumina (short-...

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Literature Corpus work
7f4f8a20-12ca-5f6c-a830-27c2bf91c7af
DOI
10.21203/rs.3.rs-7036422/v1
Open publication

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Benchmarking Illumina and Oxford Nanopore Technologies (ONT) sequencing platforms for whole genome sequencing of bacterial genomes and use in clinical microbiologyDOI 10.21203/rs.3.rs-7036422/v1
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