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Nanopore sequencing enables highly accurate genotyping and identification of resistance determinants in key nosocomial pathogens.

Microbial genomics - 1 Mar 2026

Cottingham Hugh, Judd Louise M, Harshegyi-Hand Taylor, Wisniewski Jessica A, Blakeway Luke V, Hong Tiffany, Parker Matthew H, Peleg Anton Y, Holt Kathryn E, Hawkey Jane, Macesic Nenad

Abstract excerpt

Whole-genome sequencing of bacterial pathogens can positively impact infectious disease management in clinical contexts, both in individual settings and by assisting infection prevention efforts. However, logistical issues have often prevented its translation into clinical settings. Oxford Nanopore Technologies (ONT) platforms are flexible and affordable and now offer accuracy comparable to other sequencing...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 41891186
DOI: 10.1099/mgen.0.001657
PMCID: PMC13058751

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 8 Sept 2026.

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