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Influence of Sequencing Technology on Pangenome-level Analysis and Detection of Antimicrobial Resistance Genes in ESKAPE Pathogens

2025-01-11

Abstract excerpt

As sequencing costs decrease, short-read and long-read technologies are indispensable tools for uncovering the genetic drivers behind bacterial pathogen resistance. This study explores the differences between the use of short-read (Illumina) and long-read (Oxford Nanopore Technologies, ONT) sequencing in detecting antimicrobial resistance (AMR) genes in ESKAPE pathogens ( Enterococcus faecium, Staphylococcus aure...

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Literature Corpus work
a00cb22a-ea7e-5e20-b21e-2d495a13761f
DOI
10.1101/2025.01.08.631980
Open publication

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