Article

Cell-type specific prediction of RNA stability from RNA-protein interactions

2024-11-19

Abstract excerpt

RNA-binding proteins (RBPs) are important contributors to post-transcriptional regulatory processes. The combinatorial action of expressed RBPs and non-coding factors bound to the same transcript determines post-transcriptional properties of the mRNA in a context-dependent manner. To gain a better understanding of RNA stability and translational activity across different conditions, we have compiled and analyzed a...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 7d120a5d-5246-519c-ab78-6def40e99927
DOI: 10.1101/2024.11.19.624283

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Cell-type specific prediction of RNA stability from RNA-protein interactionsDOI 10.1101/2024.11.19.624283Read

Integrative classification of human coding and non-coding genes based on RNA metabolism profilesSemantic proximity Read

Deciphering human ribonucleoprotein regulatory networksSemantic proximity Read

DRUID: A pipeline for reproducible transcriptome-wide measurements of mRNA stabilitySemantic proximity Read

Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissuesSemantic proximity Read

Decoding RNA Metabolism by RNA-linked CRISPR Screening in Human CellsSemantic proximity Read

The genetic and biochemical determinants of mRNA degradation rates in mammalsSemantic proximity Read

RNA-binding proteins of COSMIC importance in cancer.Semantic proximity Read

Predicting the translation efficiency of messenger RNA in mammalian cellsSemantic proximity Read

Principles of mRNA control by human PUM proteins elucidated from multi-modal experiments and integrative data analysisSemantic proximity Read

Quantification of translation uncovers the functions of the alternative transcriptomeSemantic proximity Read

Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes.Semantic proximity Read

RNA-binding proteins in human genetic disease.Semantic proximity Read