Article

A high-level programming language for generative biology with Proto

2026-06-23

Abstract excerpt

Programmable composition of complex systems is a longstanding goal of biological research. Generative modeling has improved the reliability of computational design, but existing methods are highly specialized and are difficult to extend or compose. Here, we introduce Proto, a high-level programming language for generative biology. By composing a small set of abstract primitives into structured programs, Proto enco...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 7b93ad07-bf70-5fcf-8340-a7b7a9111a61
DOI: 10.64898/2026.06.22.733870

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

A high-level programming language for generative biology with ProtoDOI 10.64898/2026.06.22.733870Read

Generative inverse design of RNA structure and function with gRNAdeSemantic proximity Read

yakRNA Design: A semantic multimodal RNA composerSemantic proximity Read

Generative Design of Cell Type-Specific RNA Splicing Elements for Programmable Gene RegulationSemantic proximity Read

Programming Biomolecular Interactions with All-Atom Generative ModelSemantic proximity Read

Unlocking Programmable and Creative RNA Sequence Design with RDiffusionSemantic proximity Read

Generative modeling for RNA splicing prediction and designSemantic proximity Read

Generative genomics accurately predicts future experimental resultsSemantic proximity Read

Towards parsimonious generative modeling of RNA families.Semantic proximity Read

Protein design and variant prediction using autoregressive generative models.Semantic proximity Read

Efficient exploration of sequence space enables rapid generation of functional genome editorsSemantic proximity Read

Illuminating protein space with a programmable generative modelSemantic proximity Read

Designing AI-programmable therapeutics with the EDEN family of foundation modelsSemantic proximity Read