Article
Protein design and variant prediction using autoregressive generative models.
Nature communications - 23 Apr 2021
Shin Jung-Eun, Riesselman Adam J, Kollasch Aaron W, McMahon Conor, Simon Elana, Sander Chris, Manglik Aashish, Kruse Andrew C, Marks Debora S
Abstract excerpt
The ability to design functional sequences and predict effects of variation is central to protein engineering and biotherapeutics. State-of-art computational methods rely on models that leverage evolutionary information but are inadequate for important applications where multiple sequence alignments are not robust. Such applications include the prediction of variant effects of indels, disordered proteins, and the...
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