Article
Long-term evolution of regulatory DNA sequences. Part 1: simulations on global, biophysically-realistic genotype-phenotype maps.
Current opinion in genetics & development - 1 Aug 2026
Mascolo Elia, Borbély Réka, Herrera-Álvarez Santiago, Guet Calin C, Crocker Justin, Tkačik Gašper
Abstract excerpt
Promoters and enhancers are cis-regulatory elements (CREs), DNA sequences that bind transcription factor (TF) proteins to up- or down-regulate target genes. Decades-long efforts yielded TF-DNA interaction models that predict how strongly an individual TF binds arbitrary DNA sequences and how individual binding events on the CRE combine to affect gene expression. These insights can be synthesized into a global,...
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