Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Prediction and integration of metabolite-protein interactions with genome-scale metabolic models.

Metabolic engineering - 1 Mar 2024

Habibpour Mahdis, Razaghi-Moghadam Zahra, Nikoloski Zoran

Abstract excerpt

Metabolites, as small molecules, can act not only as substrates to enzymes, but also as effectors of activity of proteins with different functions, thereby affecting various cellular processes. While several experimental techniques have started to catalogue the metabolite-protein interactions (MPIs) present in different cellular contexts, characterizing the functional relevance of MPIs remains a challenging...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Metabolic Networks and Pathways
Share to Models, Biological

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Phenotype

Source

Identifiers

PMID: 38367764
DOI: 10.1016/j.ymben.2024.02.008

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Prediction and integration of metabolite-protein interactions with genome-scale metabolic models.PMID 38367764Read ↗

Constraint-based models predict metabolic and associated cellular functions.Semantic proximity Read ↗

Protein constraints in genome-scale metabolic models: Data integration, parameter estimation, and prediction of metabolic phenotypes.Semantic proximity Read ↗

Improving the phenotype predictions of a yeast genome-scale metabolic model by incorporating enzymatic constraints.Semantic proximity Read ↗

Computing the functional proteome: recent progress and future prospects for genome-scale models.Semantic proximity Read ↗

Stoichiometric Representation of Gene-Protein-Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction.Semantic proximity Read ↗

Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0.Semantic proximity Read ↗

Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network.Semantic proximity Read ↗

Synergisms of machine learning and constraint-based modeling of metabolism for analysis and optimization of fermentation parameters.Semantic proximity Read ↗

CBFA: phenotype prediction integrating metabolic models with constraints derived from experimental data.Semantic proximity Read ↗

An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models.Semantic proximity Read ↗

Integration of enzyme constraints in a genome-scale metabolic model of Aspergillus niger improves phenotype predictions.Semantic proximity Read ↗

A Mechanistic Model for Genome-Scale Estimations of Metabolic ActivitySemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.