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ChemGAPP: a tool for chemical genomics analysis and phenotypic profiling.

Bioinformatics (Oxford, England) - 3 Apr 2023

Doherty Hannah M, Kritikos George, Galardini Marco, Banzhaf Manuel, Moradigaravand Danesh

Abstract excerpt

MOTIVATION: High-throughput chemical genomic screens produce informative datasets, providing valuable insights into unknown gene function on a genome-wide level. However, there is currently no comprehensive analytic package publicly available. We developed ChemGAPP to bridge this gap. ChemGAPP integrates various steps in a streamlined and user-friendly format, including rigorous quality control measures to curate...

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PMID: 37014365
DOI: 10.1093/bioinformatics/btad171
PMCID: PMC10085634

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