Article
Effect of reduced genomic representation on using runs of homozygosity for inbreeding characterization.
Molecular ecology resources - 1 May 2023
Lavanchy Eléonore, Goudet Jérôme
Abstract excerpt
Genomic measures of inbreeding based on identical-by-descent (IBD) segments are increasingly used to measure inbreeding and mostly estimated on SNP arrays and whole-genome sequencing (WGS) data. However, some softwares recurrently used for their estimation assume that genomic positions which have not been genotyped are nonvariant. This might be true for WGS data, but not for reduced genomic representations and...
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