Article
The Impact of Purifying and Background Selection on the Inference of Population History: Problems and Prospects.
Molecular biology and evolution - 25 Jun 2021
Johri Parul, Riall Kellen, Becher Hannes, Excoffier Laurent, Charlesworth Brian, Jensen Jeffrey D
Abstract excerpt
Current procedures for inferring population history generally assume complete neutrality-that is, they neglect both direct selection and the effects of selection on linked sites. We here examine how the presence of direct purifying selection and background selection may bias demographic inference by evaluating two commonly-used methods (MSMC and fastsimcoal2), specifically studying how the underlying shape of the...
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