Article
Large-scale DNA-based phenotypic recording and deep learning enable highly accurate sequence-function mapping.
Nature communications - 15 Jul 2020
Höllerer Simon, Papaxanthos Laetitia, Gumpinger Anja Cathrin, Fischer Katrin, Beisel Christian, Borgwardt Karsten, Benenson Yaakov, Jeschek Markus
Abstract excerpt
Predicting effects of gene regulatory elements (GREs) is a longstanding challenge in biology. Machine learning may address this, but requires large datasets linking GREs to their quantitative function. However, experimental methods to generate such datasets are either application-specific or technically complex and error-prone. Here, we introduce DNA-based phenotypic recording as a widely applicable, practicable...
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