Article
Minimum error correction-based haplotype assembly: Considerations for long read data.
PloS one - 1 Jan 2020
Majidian Sina, Kahaei Mohammad Hossein, de Ridder Dick
Abstract excerpt
The single nucleotide polymorphism (SNP) is the most widely studied type of genetic variation. A haplotype is defined as the sequence of alleles at SNP sites on each haploid chromosome. Haplotype information is essential in unravelling the genome-phenotype association. Haplotype assembly is a well-known approach for reconstructing haplotypes, exploiting reads generated by DNA sequencing devices. The Minimum Error...
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