Article
Progressive approach for SNP calling and haplotype assembly using single molecular sequencing data.
Bioinformatics (Oxford, England) - 15 Jun 2018
Guo Fei, Wang Dan, Wang Lusheng
Abstract excerpt
Motivation: Haplotype information is essential to the complete description and interpretation of genomes, genetic diversity and genetic ancestry. The new technologies can provide Single Molecular Sequencing (SMS) data that cover about 90% of positions over chromosomes. However, the SMS data has a higher error rate comparing to 1% error rate for short reads. Thus, it becomes very difficult for SNP calling and...
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