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Article

TissueCoCoPUTs: Novel Human Tissue-Specific Codon and Codon-Pair Usage Tables Based on Differential Tissue Gene Expression.

Journal of molecular biology - 15 May 2020

Kames Jacob, Alexaki Aikaterini, Holcomb David D, Santana-Quintero Luis V, Athey John C, Hamasaki-Katagiri Nobuko, Katneni Upendra, Golikov Anton, Ibla Juan C, Bar Haim, Kimchi-Sarfaty Chava

Abstract excerpt

Protein expression in multicellular organisms varies widely across tissues. Codon usage in the transcriptome of each tissue is derived from genomic codon usage and the relative expression level of each gene. We created a comprehensive computational resource that houses tissue-specific codon, codon-pair, and dinucleotide usage data for 51 Homo sapiens tissues (TissueCoCoPUTs:...

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Identifiers

PMID: 31982380
DOI: 10.1016/j.jmb.2020.01.011

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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