Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

SomaticSignatures: inferring mutational signatures from single-nucleotide variants.

Bioinformatics (Oxford, England) - 15 Nov 2015

Gehring Julian S, Fischer Bernd, Lawrence Michael, Huber Wolfgang

Abstract excerpt

UNLABELLED: Mutational signatures are patterns in the occurrence of somatic single-nucleotide variants that can reflect underlying mutational processes. The SomaticSignatures package provides flexible, interoperable and easy-to-use tools that identify such signatures in cancer sequencing data. It facilitates large-scale, cross-dataset estimation of mutational signatures, implements existing methods for pattern...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genome, Human
Share to Mutation
Share to Neoplasms

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Polymorphism, Single Nucleotide

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 26163694
DOI: 10.1093/bioinformatics/btv408
PMCID: PMC4817139

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

SomaticSignatures: inferring mutational signatures from single-nucleotide variants.PMID 26163694Read ↗

SomaticSignatures: Inferring Mutational Signatures from Single Nucleotide VariantsSemantic proximity Read ↗

MutSignatures: an R package for extraction and analysis of cancer mutational signatures.Semantic proximity Read ↗

Mutational Signatures in Cancer (MuSiCa): a web application to implement mutational signatures analysis in cancer samples.Semantic proximity Read ↗

MutSignatures: An R Package for Extraction and Analysis of Cancer Mutational SignaturesSemantic proximity Read ↗

Bioinformatic Methods to Identify Mutational Signatures in Cancer.Semantic proximity Read ↗

Identification of mutational signatures active in individual tumorsSemantic proximity Read ↗

iMutSig: a web application to identify the most similar mutational signature using shinySemantic proximity Read ↗

Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment.Semantic proximity Read ↗

CANCERSIGN: a user-friendly and robust tool for identification and classification of mutational signatures and patterns in cancer genomesSemantic proximity Read ↗

Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignmentSemantic proximity Read ↗

MutationalPatterns: the one stop shop for the analysis of mutational processes.Semantic proximity Read ↗

Helmsman: fast and efficient generation of input matrices for mutation signature analysisSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.