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Article

RADIA: RNA and DNA integrated analysis for somatic mutation detection.

PloS one - 1 Jan 2014

Radenbaugh Amie J, Ma Singer, Ewing Adam, Stuart Joshua M, Collisson Eric A, Zhu Jingchun, Haussler David

Abstract excerpt

The detection of somatic single nucleotide variants is a crucial component to the characterization of the cancer genome. Mutation calling algorithms thus far have focused on comparing the normal and tumor genomes from the same individual. In recent years, it has become routine for projects like The Cancer Genome Atlas (TCGA) to also sequence the tumor RNA. Here we present RADIA (RNA and DNA Integrated Analysis),...

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Identifiers

PMID: 25405470
DOI: 10.1371/journal.pone.0111516
PMCID: PMC4236012

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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