Article
Tracing the evolution of lineage-specific transcription factor binding sites in a birth-death framework.
PLoS computational biology - 1 Aug 2014
Yokoyama Ken Daigoro, Zhang Yang, Ma Jian
Abstract excerpt
Changes in cis-regulatory element composition that result in novel patterns of gene expression are thought to be a major contributor to the evolution of lineage-specific traits. Although transcription factor binding events show substantial variation across species, most computational approaches to study regulatory elements focus primarily upon highly conserved sites, and rely heavily upon multiple sequence...
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