Article
On the choice of degrees of freedom for testing gene-gene interactions.
Statistics in medicine - 10 Dec 2014
Ueki Masao
Abstract excerpt
In gene-gene interaction analysis using single nucleotide polymorphism (SNP) data, empty cells arise in the genotype contingency table more frequently than in single SNP association studies. Empty cells lead to unidentifiable regression coefficients in regression model fitting. It is unclear whether the degrees of freedom (d.f.) for testing interactions are reduced for such sparse contingency tables. Boolean...
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