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ATHLATES: accurate typing of human leukocyte antigen through exome sequencing.

Nucleic acids research - 1 Aug 2013

Liu Chang, Yang Xiao, Duffy Brian, Mohanakumar Thalachallour, Mitra Robi D, Zody Michael C, Pfeifer John D

Abstract excerpt

Human leukocyte antigen (HLA) typing at the allelic level can in theory be achieved using whole exome sequencing (exome-seq) data with no added cost but has been hindered by its computational challenge. We developed ATHLATES, a program that applies assembly, allele identification and allelic pair...

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Identifiers

PMID: 23748956
DOI: 10.1093/nar/gkt481
PMCID: PMC3737559

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 4 Sept 2026. Prepared record publication-23748956-2026-09-04.2. Manifest publication-graph-cohort-2026-09-04.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 4 Sept 2026.

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