Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Direct evidence for RNA-RNA interactions at the 3' end of the Hepatitis C virus genome using surface plasmon resonance.

RNA (New York, N.Y.) - 1 Jul 2013

Palau William, Masante Cyril, Ventura Michel, Di Primo Carmelo

Abstract excerpt

Surface plasmon resonance was used to investigate two previously described interactions analyzed by reverse genetics and complementation mutation experiments, involving 5BSL3.2, a stem-loop located in the NS5B coding region of HCV. 5BSL3.2 was immobilized on a sensor chip by streptavidin-biotin coupling, and its interaction either with the SL2 stem-loop of the 3' end or with an upstream sequence centered on...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Dimerization
Share to Genome, Viral
Share to Inverted Repeat Sequences

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Nucleic Acid Conformation

Share to Nucleotide Motifs

Share to RNA Stability

Share to Surface Plasmon Resonance

Share to Virus Replication

Source

Open in PubMed Open full text

Identifiers

PMID: 23651615
DOI: 10.1261/rna.037606.112
PMCID: PMC3683932

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Direct evidence for RNA-RNA interactions at the 3' end of the Hepatitis C virus genome using surface plasmon resonance.PMID 23651615Read ↗

An unexpected RNA distal interaction mode found in an essential region of the hepatitis C virus genome.Semantic proximity Read ↗

Mutations of the SL2 dimerization sequence of the hepatitis C genome abrogate viral replication.Semantic proximity Read ↗

A long-range RNA–RNA interaction between the 5′ and 3′ ends of the HCV genomeSemantic proximity Read ↗

Dysregulation of Hepatitis B Virus Nucleocapsid Assembly with RNA-directed Small LigandsSemantic proximity Read ↗

Dynamics of hepatitis C virus (HCV) RNA-dependent RNA polymerase NS5B in complex with RNA.Semantic proximity Read ↗

The role of the C-terminal helix of U1A protein in the interaction with U1hpII RNA.Semantic proximity Read ↗

Single-molecule fluorescence resonance energy transfer assays reveal heterogeneous folding ensembles in a simple RNA stem-loop.Semantic proximity Read ↗

Affinities of the nucleocapsid protein for variants of SL3 RNA in HIV-1.Semantic proximity Read ↗

Probing the kinetics of formation of the bacteriophage MS2 translational operator complex: identification of a protein conformer unable to bind RNA.Semantic proximity Read ↗

Rev Binds Specifically to a Purine Loop in the SL1 Region of the HIV-1 Leader RNASemantic proximity Read ↗

A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication.Semantic proximity Read ↗

Dynamic Interconversions of HCV Helicase Binding Modes on the Nucleic Acid Substrate.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.