Article
Mining gold dust under the genome wide significance level: a two-stage approach to analysis of GWAS.
Genetic epidemiology - 1 Feb 2011
Shi Gang, Boerwinkle Eric, Morrison Alanna C, Gu C Charles, Chakravarti Aravinda, Rao D C
Abstract excerpt
We propose a two-stage approach to analyze genome-wide association data in order to identify a set of promising single-nucleotide polymorphisms (SNPs). In stage one, we select a list of top signals from single SNP analyses by controlling false discovery rate. In stage two, we use the least absolute shrinkage and selection operator (LASSO) regression to reduce false positives. The proposed approach was evaluated...
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