Article
dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data.
Bioinformatics (Oxford, England) - 22 May 2004
Lin Ming, Wei Lee-Jen, Sellers William R, Lieberfarb Marshall, Wong Wing Hung, Li Cheng
Abstract excerpt
MOTIVATION: Oligonucleotide microarrays allow genotyping of thousands of single-nucleotide polymorphisms (SNPs) in parallel. Recently, this technology has been applied to loss-of-heterozygosity (LOH) analysis of paired normal and tumor samples. However, methods and software for analyzing such data are not fully developed. RESULT: Here, we report automated methods for pooling SNP array replicates to make LOH...
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