Article
SNP haplotype tagging from DNA pools of two individuals.
BMC bioinformatics - 22 Apr 2003
Hoh Josephine, Matsuda Fumihiko, Peng Xu, Markovic Daniela, Lathrop Mark G, Ott Jurg
Abstract excerpt
BACKGROUND: DNA pooling is a technique to reduce genotyping effort while incurring only minor losses in accuracy of allele frequency estimates for single nucleotide polymorphism (SNP) markers. RESULTS: We present an algorithm for reconstructing haplotypes (alleles for multiple SNPs on same chromosome) from pools of two individual DNAs, in which Hardy-Weinberg equilibrium conditions or other assumptions are not...
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