Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

RNA sequence and secondary structural determinants in a minimal viral promoter that directs replicase recognition and initiation of genomic plus-strand RNA synthesis.

Journal of molecular biology - 3 Dec 1999

Sivakumaran K, Kim C H, Tayon R, Kao C C

Abstract excerpt

Viral RNA replication provides a useful system to study the structure and function of RNAs and the mechanism of RNA synthesis from RNA templates. Previously we demonstrated that a 27 nt RNA from brome mosaic virus (BMV) can direct correct initiation of genomic plus-strand RNA synthesis by the BMV replicase. In this study, using biochemical, nuclear magnetic resonance, and thermodynamic analyses, we determined...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Binding Sites
Share to DNA-Directed DNA Polymerase

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Magnetic Resonance Spectroscopy

Share to Nucleic Acid Conformation

Share to Promoter Regions, Genetic

Share to RNA, Viral

Share to Sequence Analysis, RNA

Share to Templates, Genetic

Source

Open in PubMed Open full text

Identifiers

PMID: 10610788
DOI: 10.1006/jmbi.1999.3297
PMCID: PMC7172556

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

RNA sequence and secondary structural determinants in a minimal viral promoter that directs replicase recognition and initiation of genomic plus-strand RNA synthesis.PMID 10610788Read ↗

A mutant viral RNA promoter with an altered conformation retains efficient recognition by a viral RNA replicase through a solution-exposed adenine.Semantic proximity Read ↗

RNA motifs that determine specificity between a viral replicase and its promoter.Semantic proximity Read ↗

Mechanistic analysis of RNA synthesis by RNA-dependent RNA polymerase from two promoters reveals similarities to DNA-dependent RNA polymerase.Semantic proximity Read ↗

A minimal RNA promoter for minus-strand RNA synthesis by the brome mosaic virus polymerase complex.Semantic proximity Read ↗

The subgenomic promoter of brome mosaic virus folds into a stem-loop structure capped by a pseudo-triloop that is structurally similar to the triloop of the genomic promoter.Semantic proximity Read ↗

NMR Studies of the Structure and Function of the HIV-1 5′-LeaderSemantic proximity Read ↗

Subgenomic promoter recognition by the norovirus RNA-dependent RNA polymerases.Semantic proximity Read ↗

cis- and trans-acting functions of brome mosaic virus protein 1a in genomic RNA1 replication.Semantic proximity Read ↗

Cis-acting RNA elements at the 5′ end of Sindbis virus genome RNA regulate minus- and plus-strand RNA synthesisSemantic proximity Read ↗

Unique nucleotide differences in the conserved 3' termini of brome mosaic virus RNAs are maintained through their optimization of genome replication.Semantic proximity Read ↗

Structure of the dengue virus RNA promoterSemantic proximity Read ↗

Structural and Functional Elements of the Promoter Encoded by the 5′ Untranslated Region of the Venezuelan Equine Encephalitis Virus GenomeSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.