Article

HLA-MA: Simple yet powerful matching of samples using HLA typing results

2016-08-24

Abstract excerpt

<h4>Summary</h4> We propose the simple method HLA-MA for consistency checking in pipelines operating on human HTS data. The method is based on the HLA typing result of the state-of-the-art method Opti-Type. Provided that there is sufficient coverage of the HLA loci, comparing HLA types allows for simple, fast, and robust matching of samples from whole genome, exome, and RNA-seq data. This approach is reliable for...

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Literature Corpus work: ecfa7ffa-d35a-562d-8841-1354eff9c534
DOI: 10.1101/066548

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