Article

CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticity

2023-01-11

Abstract excerpt

<h4>ABSTRACT</h4> Tissues are organized in cellular niches, the composition and interactions of which can be investigated using spatial omics technologies. However, systematic analyses of tissue composition are challenged by the scale and diversity of the data. Here we present CellCharter, an algorithmic framework to identify, characterize, and compare cellular niches in spatially resolved datasets. CellCharter o...

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Literature Corpus work: a27008b9-ce42-55f9-9fc9-068bf13478f8
DOI: 10.1101/2023.01.10.523386

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