Article

Large scale automated phylogenomical analysis of bacterial whole-genome isolates and the Evergreen platform

2019-02-05

Abstract excerpt

Public health authorities whole-genome sequence thousands of pathogenic isolates each month for microbial diagnostics and surveillance of pathogenic bacteria. The computational methods have not kept up with the deluge of data and need for real-time results. We have therefore created a bioinformatics pipeline for rapid subtyping and continuous phylogenomic analysis of bacterial samples, suited for large-scale surve...

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Literature Corpus work: 818e8ffe-fdbf-592c-bbfa-146481418c0e
DOI: 10.1101/540138

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