Article

Semantic fragment representations for coordinate-free analysis of genomics data

2026-07-10

Abstract excerpt

Many genomic assays begin with individual DNA fragments, but standard analysis quickly collapses those molecules into counts over genomic intervals. Rich information carried by each fragment, including its sequence, fragment body, cleavage boundaries, and local flanking context, is lost in this process. This loss is especially apparent in mixed-source and heterogeneous samples, where individual fragments originate...

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Literature Corpus work: 2b50ee74-056c-588c-83a2-8194bf3baf3c
DOI: 10.64898/2026.07.09.737627

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