Article

SIANN: Strain Identification by Alignment to Near Neighbors

2014-01-10

Abstract excerpt

Next-generation sequencing is increasingly being used to study samples composed of mixtures of organisms, such as in clinical applications where the presence of a pathogen at very low abundance may be highly important. We present an analytical method (SIANN: Strain Identification by Alignment to Near Neighbors) specifically designed to rapidly detect a set of target organisms in mixed samples that achieves a high...

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Literature Corpus work: 165c43c7-9b86-59e9-8eef-553632ebefb0
DOI: 10.1101/001727

Open publication

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