Article

Strain Level Microbial Detection and Quantification with Applications to Single Cell Metagenomics

2020-06-14

Abstract excerpt

The identification and quantification of microbial abundance at the species or strain level from sequencing data is crucial for our understanding of human health and disease. Existing approaches for microbial abundance estimation either use accurate but computationally expensive alignment-based approaches for species-level estimation or less accurate but computationally fast alignment-free approaches that fail to...

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Literature Corpus work: 1e50fab8-91ea-5195-b182-67063f73adfe
DOI: 10.1101/2020.06.12.149245

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