Article

StrainXpress: strain aware metagenome assembly from short reads

2022-03-27

Abstract excerpt

Next-generation sequencing based metagenomics has enabled to identify microorganisms in characteristic habitats without the need for lengthy cultivation. Importantly, clinically relevant phenomena such as resistance to medication, virulence or interactions with the environment can vary already within species. Therefore, a major current challenge is to reconstruct individual genomes from the sequencing reads at the...

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Literature Corpus work: a9ebe1c9-18ff-57a4-9c5e-75600722a3eb
DOI: 10.1101/2022.03.23.485539

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